I keep looking at this and thinking it's not right.

It looks to symmetrical.
COMSOL's website says the RF module can do far field calculations, and the antenna placement would appear to put at least part of the frustum in the near field. It looks by eyeball that the software is only looking at the far field being reflecting off the small end of the frustum.
Or am I missing something?
This COMSOL Finite Element Analysis solution is a numerical solution of Maxwell's differential equations, taking into account the boundary conditions, including the losses responsible for the finite Q. What you are looking at is the steady state of the electromagnetic fields.
The steady state electromagnetic field solution are standing waves. Although the initial condition is not symmetrical, due to travelling waves, this is a very-short-lived transient, as the solution soon reaches a (practically) symmetric steady state.
This has been shown by @aero with a very interesting movie based on a 2D solution of the truncated cone as a flat trapezium using MEEP which is a Finite Difference code (free from MIT alumni) that performs the full transient solution. It was neat to see how the (practically) symmetric steady state was soon reached starting from an unsymmetric initial condition.
Furthermore, as pointed out by RotoSequence, the steady state solution for the magnetic field and a COMSOL thermal analysis was corroborated by temperature measurements using an infrared thermal camera, which verifies that the heating is due to induction heating from the magnetic field.
I obtained an exact solution for the symmetric steady state (which of course does not take into account the initial unsymmetric transient) and it fully verifies NASA's COMSOL FEA steady state solution for the electromagnetic field: the natural frequency is within 1% of the exact solution and the mode shapes are extremely close (I posted the exact solution comparison some time ago).
If one is interested in near-field far-field, transient, fully complex solution (including initial travelling waves morphing into standing waves, as well as evanescent waves) then one has to resort to a time-marching solution as with MEEP finite difference approach or a [FEA in space/FD in time] solution that imposes a finite element discretization in space and a finite difference time discretization. (Such a transient, 3D solution containing evanescent waves is extremely time consuming.)
Highlighted above in red.
This very short lived transient is the key to everything. The aspect of this that we need to find ways to exploit further.
And while on the subject of simulation: Guido Fetta of Cannae tells me that his COMSOL(?unsure) sim predicts a nonzero net Lorentz force for his device. Now, we all learned that no closed system of currents can produce such a net force. There's a paradox. He insists that there are no significant cumulative rounding errors.
Anyone have insight into this?
There cannot be a paradox.
Let's remember that the COMSOL FEA solution is the steady state solution showing the spatial distribution of the field. Remember that the steady state solution of Maxwell's differential equations can be accomplished by separation of variables.
The harmonic (time varying) part of the field is assumed. So, for example, the Magnetic Field shown on the COMSOL output is the spatial distribution of the magnetic field. Now, what is shown as a maximum and what is shown as a minimum is arbitrary, since depending at what time one arbitrarily chooses to display the magnetic field, as the magnetic field varies with time like a harmonic function.
Similarly, the Poynting vector is a harmonic function of time, and this is, as you point out, well known in the literature, with a frequency which is twice the frequency of the magnetic and the electric field.
Although the spatial distribution of the Poynting vector is non-zero at arbitrary points in time, over a whole cycle the Poynting vector (and the Lorentz force) for a cavity sums up to exactly zero, just like the mean of the magnetic and electric fields is also zero. COMSOL is an excellent package.
The Poynting vector solution of Maxwell's equations points towards the Big Base half of the time, and points towards the Small Base half of the time.
COMSOL will not tell that to the analyst obtaining a steady solution where the harmonic function of time is implicit.
It is recommended that COMSOL and any other FEA packages (ANSYS MultiPhysics, etc., ABAQUS, ADINA, NASTRAN) should be run by experienced FEA analysts, to prevent errors. (Ditto for FD, control volume , and any other numerical packages).
@deltaMass, you're on the right track. We've shown that the utility of COMSOL in figuring out this problem is limited as COMSOL is considering the standing wave and isn't considering the traveling wave. It gives no consideration to what is happening over extended time (over multiple full cycles) or to what is happening to a resonant cavity under dynamic operation, for example while under acceleration. COMSOL provides no insight as to what is happening when the resonant cavity is being excited by FM or other sources of phase noise. Building off the comments about COMSOL's ability to simulate mode shapes..that was proven to be accurate by Paul March's thermal shots here:
http://forum.nasaspaceflight.com/index.php?topic=36313.msg1327406#msg1327406See Thermal IR comparison.pdf
Quoting Rodal and source is Star-drive comments:
Source:http://forum.nasaspaceflight.com/index.php?topic=36313.msg1370374#msg1370374
It is my understanding, from what Paul March wrote, that the main controlling parameter in determining the thrust generation performance of the EM-Drive is the rate of phase modulation of the RF signal that is injected into the resonant cavity.
This requires an FM modulated signal of around 100 kHz deviation that dithers back and forth around the resonant cavity's resonant frequency as fast as possible.
That main controlling parameter should not be taken lightly. See Mr. Shawyer's comments in the screenshot about how the standing wave is constructed by addition of a traveling wave which is
IN PHASE with the standing wave. Those of us who regularly work with electronics know about constructive and destructive interference, and this mechanism applied here is what puts energy into and takes energy out of the standing wave within the cavity.
If I present a signal at the loop probe (or dipole or waveguide slot) which is in phase with the standing wave, energy will couple into the cavity. If I present a signal at the loop probe (or dipole or waveguide slot) which is out of phase with the standing wave, energy will couple out of the cavity. This works both ways. The way Paul March mentioned, and what Shawyer mentions as motor/generator mode.
We can create the effects by the above method that mimic what a photon would experience in an accelerating box. This box is a quantum harmonic oscillator which can only resonate at precise discrete frequencies. This all reminds me of @Notsosureofit's AFR thrust equation.
http://usersguidetotheuniverse.com/?p=2865http://physics.stackexchange.com/questions/78119/what-are-good-examples-to-demonstrate-einsteins-mass-energy-relation (scroll down)
I'm linking to these because they contain useful math. Rodal likes math.

COMSOL is an excellent package.
Sure, but I wouldn't use a wrench in place of a screwdriver either. The utility of COMSOL should not be extended past where it is useful. COMSOL has no usefulness beyond the "knowns." The unknowns can't be simulated. See Paul March & Mr. Shawyer's comments in this post, in screenshots and quotes.
Let's not forget that Mr. Shawyer (the inventor of EMdrive) is
telling us to NOT get hung up on the standing wave, see screenshot:
http://forum.nasaspaceflight.com/index.php?topic=36313.msg1368066#msg1368066The standing waves inside the frustum are simply a large potential energy store. Those standing waves still have to be put to use to get work out of them. From what Shawyer and Paul March have told us, there are two known ways......So far we've uncovered two ways; 1) Introducing phase noise into the excitation signal *, 2) Accelerating the cavity **. Both of these play off the same theme, which is that a resonant cavity will only resonate at a narrow frequency range within its bandwidth. If energy within that cavity is shifted out of that narrow bandwidth, it will no longer resonate, thus an energy deficit to be filled by the traveling wave.
*Theorized before, now proven by Paul March:
http://forum.nasaspaceflight.com/index.php?topic=36313.msg1366823#msg1366823http://forum.nasaspaceflight.com/index.php?topic=36313.msg1331792#msg1331792**Red shift/Blue shift changes the phase. Also see Shawyer's comments here:
http://www.emdrive.com/EmDriveForceMeasurement.pdf and here: see motor/generator mode comments
http://www.emdrive.com/IAC13paper17254.v2.pdf***Possible 3 is I've been toying around with the idea of using phase shift keying as a means to modulate the excitation signal, this approach is similar to what Paul March was talking about using FM, but using PSK keeps the signal on resonant frequency peak, while varying the phase. So this keeps the frequency the same, but flips the phase, so it might not work. I know from experience that a PSK signal as viewed on a spectrum analyzer is a distribution above and below CF. I envision varying the symbol rate as a means to control thrust. I believe the directionality from both Paul's and my PSK idea comes from two sources, 1) The helicity of the polymer chains, 2) non-reciprocity within the cavity, which I've posted papers on. For now I acknowledge there is no proof of any non-reciprocity or PT symmetry breaking (either alone or as a pair) happening within Emdrive, yet I expect it will be coming.
****Possible 4, excite EMdrive with two signals on separate cables. I know these cavities can support multiple modes at ones, so why not exploit that, see where it goes?
https://goo.gl/nosWnF